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Simultaneous Metabolite, Protein, Lipid Extraction (SIMPLEX): A Combinatorial
Multimolecular Omics Approach for Systems Biology.
Coman C, Solari FA, Hentschel A, Sickmann A, Zahedi RP, Ahrends R.
Mol Cell Proteomics. 2016 Apr;15(4):1453-66. doi: 10.1074/mcp.

Controlling low rates of cell differentiation through noise and ultrahigh feedback.
Ahrends R, Ota A, Kovary KM, Kudo T, Park BO, Teruel MN.
Science. 2014 Jun 20;344(6190):1384-9. doi: 10.1126/science.1252079.

Parallel adaptive feedback enhances reliability of the Ca2+ signaling system.
Abell E, Ahrends R, Bandara S, Park BO, Teruel MN.
Proc Natl Acad Sci U S A. 2011 Aug 30;108(35):14485-90. doi: 10.1073/pnas.1018266108. Epub 2011 Aug 15.

Self-organization of signal transduction.
Scheler G.
F1000Res. 2013 Apr 23;2:116. doi: 10.12688/f1000research.2-116.v1

Learning intrinsic excitability in medium spiny neurons
Scheler G.
F1000Res. 2013 Mar 14 [revised 2014 Feb 26];2:88. doi: 10.12688/f1000research.2-88.v2

Differential fates of biomolecules delivered to target cells via extracellular vesicles.
Kanada M, Bachmann MH, Hardy JW, Frimannson DO, Bronsart L, Wang A, Sylvester MD, Schmidt TL, Kaspar RL,
Butte MJ, Matin AC, Contag CH.
Proc Natl Acad Sci U S A. 2015 Mar 24;112(12):E1433-42. doi: 10.1073/pnas.1418401112

Longitudinal, noninvasive imaging of T-cell effector function and proliferation in living subjects
Patel MR, Chang YF, Chen IY, Bachmann MH, Yan X, Contag CH, Gambhir SS.
Cancer Res. 2010 Dec 15;70(24):10141-9. doi: 10.1158/0008-5472

Kinetic pathway of 40S ribosomal subunit recruitment to hepatitis C virus internal ribosome entry site.
Fuchs G, Petrov AN, Marceau CD, Popov LM, Chen J, O’Leary SE, Wang R, Carette JE, Sarnow P, Puglisi JD.
Proc Natl Acad Sci U S A. 2015 Jan 13;112(2):319-25. doi: 10.1073/pnas.1421328111

Proteomic analysis of ribosomes: translational control of mRNA populations by glycogen synthase GYS1.
Fuchs G, Diges C, Kohlstaedt LA, Wehner KA, Sarnow P.
J Mol Biol. 2011 Jul 1;410(1):118-30. doi: 10.1016/j.jmb.2011.04.064

A computer vision system for rapid search inspired by surface-based attention mechanisms from human perception.
Mohr J, Park JH, Obermayer K.
Neural Netw. 2014 Dec;60:182-93. doi: 10.1016/j.neunet.2014.08.010.

How adaptation currents change threshold, gain, and variability of neuronal spiking.
Ladenbauer J, Augustin M, Obermayer K.
J Neurophysiol. 2014 Mar;111(5):939-53. doi: 10.1152/jn.00586

On Expression Patterns and Developmental Origin of Human Brain Regions.
Kirsch L, Chechik G.
PLoS Comput Biol. 2016 Aug 26;12(8):e1005064. doi: 10.1371/journal.pcbi.1005064

Predicting protein-protein interactions in the post synaptic density.
Bar-shira O, Chechik G.
Mol Cell Neurosci. 2013 Sep;56:128-39. doi: 10.1016/j.mcn.2013.04.004

Disentangling giant component and finite cluster contributions in sparse random matrix spectra.
Kühn R.
Phys Rev E. 2016 Apr;93:042110. doi: 10.1103/PhysRevE.93.042110.

Distance distribution in configuration-model networks.
Nitzan M, Katzav E, Kühn R, Biham O.
Phys Rev E. 2016 Jun;93(6):062309. doi: 10.1103/PhysRevE.93.062309

A mathematical model for chronic myelogenous leukemia (CML) and T cell interaction.
Moore H, Li NK.
J Theor Biol. 2004 Apr 21;227(4):513-23.